Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2748

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2748: 11116 - KOG3772 M-phase inducer phosphatase, at 131237 to 131877 11116 mRNA_2749: 11117 - K02146 ATPeV0D, ATP6D V-type H+-transporting ATPase subunit d, at 132510 to 133901 11117

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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130,247 - 1.0
130,392 + 1.0
130,540 + -1.4
130,549 + -0.1
130,555 + -1.5
130,688 + 0.7
130,701 + 0.0
130,706 - 2.5
130,712 + 1.5
130,719 + -0.6
130,825 - -0.2
130,843 - -0.0
130,861 - -1.3
130,865 + -0.2
130,870 + -0.5
130,870 + 1.3
130,874 - -0.8
130,874 + -1.1
130,899 - -0.2
130,900 + -0.2
130,908 + 0.9
130,916 - 1.6
130,923 + -0.4
130,924 + 1.0
130,927 + 2.3
130,994 - 0.3
131,011 - -0.4
131,019 + 0.7
131,020 + 2.7
131,025 - 0.8
131,029 + -1.2
131,033 + 0.5
131,049 + -0.8
131,051 + -2.8
131,056 + -0.1
131,061 + 1.4
131,104 + -0.5
131,117 + -0.6
131,153 + -0.4
131,207 + -0.6
131,208 + 0.4
131,300 - 0.4
131,437 - 11116 mRNA_2748 0.31 0.6
131,467 + 11116 mRNA_2748 0.36 -0.4
131,846 + 0.7
131,870 - -1.9
132,017 - -0.8
132,020 + -0.2
132,023 - 0.6
132,041 + 1.0
132,181 + 0.2