Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2745

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113 mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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122,753 + 0.4
122,878 - -0.8
122,988 - -2.3
122,995 + 0.5
122,996 - -0.4
123,012 + 0.6
123,013 + 0.7
123,033 + -0.4
123,038 - 0.7
123,041 + 1.3
123,051 - -2.0
123,059 - 0.7
123,060 + -0.4
123,069 + -0.6
123,069 + -1.3
123,071 - 0.5
123,073 + 0.0
123,082 + -0.1
123,105 + 0.9
123,112 - 0.2
123,122 + -0.1
123,151 + -1.0
123,166 + 1.2
123,173 - 0.0
123,173 - -0.7
123,178 + 1.8
123,188 - -0.0
123,202 + 1.4
123,210 + 0.6
123,315 - -0.5
123,394 + 0.8
123,422 - -0.8
123,442 - 0.7
123,474 + -0.3
123,487 - 0.6
123,499 + -0.5
123,502 + -0.3
123,517 + -0.2
123,518 - 1.2
123,547 + 0.1
123,548 - 0.4
123,562 + -4.1
123,573 + -0.4
123,590 - 1.6
123,605 - -1.1
123,608 - -0.6
123,672 + 0.2
123,690 + -0.2
123,725 + -1.2
123,749 + 0.4
123,750 - 1.1
123,863 - -0.7
123,871 + 1.6
123,901 + 0.9
124,183 + 11113 mRNA_2745 0.12 1.7
124,185 - 11113 mRNA_2745 0.12 4.0
124,353 - 11113 mRNA_2745 0.16 0.8
124,355 - 11113 mRNA_2745 0.16 0.3
124,414 - 11113 mRNA_2745 0.18 -0.3
124,458 + 11113 mRNA_2745 0.19 0.1
124,709 - 11113 mRNA_2745 0.26 0.6
124,794 - 11113 mRNA_2745 0.28 -0.5
124,794 + 11113 mRNA_2745 0.28 0.5
125,041 + 11113 mRNA_2745 0.35 -0.9
125,048 - 11113 mRNA_2745 0.35 1.2
125,398 - 11113 mRNA_2745 0.44 0.3
125,714 + 11113 mRNA_2745 0.53 -0.3
125,794 + 11113 mRNA_2745 0.55 -2.7
125,855 + 11113 mRNA_2745 0.57 -2.4
125,941 + 11113 mRNA_2745 0.59 -0.6
126,259 - 11113 mRNA_2745 0.68 0.3
126,267 + 11113 mRNA_2745 0.68 -0.7
126,362 + 11113 mRNA_2745 0.70 -0.3
126,570 + 11113 mRNA_2745 0.76 -0.3
126,715 + 11113 mRNA_2745 0.80 -0.5
126,720 - 11113 mRNA_2745 0.80 -0.5
126,846 + 11113 mRNA_2745 0.83 -1.2
126,969 - 11113 mRNA_2745 0.87 0.4
126,969 - 11113 mRNA_2745 0.87 -0.4
127,054 + 11113 mRNA_2745 0.89 -3.3
127,325 + 0.2
127,413 + -0.9
127,419 + 0.9
127,434 - -0.5