Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2671

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038 mRNA_2671: 11039 - K00111 glpA, glpD glycerol-3-phosphate dehydrogenase, at 726293 to 729723 11039 mRNA_2672: 11040 - K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17, at 730581 to 733538 11040

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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725,372 + -0.5
725,398 + -0.2
725,400 + 1.1
725,457 - 0.2
725,590 + -0.3
725,602 + 0.3
725,745 - -0.2
725,753 + -0.5
725,765 - -1.5
725,773 + 0.5
725,774 - 1.2
725,783 + 0.8
725,800 + -0.2
725,807 + -1.6
725,814 - 1.1
725,843 - -0.7
725,879 + -0.6
725,879 + 0.7
726,006 + -1.2
726,029 + 0.1
726,045 + -0.0
726,203 + 1.1
726,748 - 11039 mRNA_2671 0.13 -0.9
727,041 + 11039 mRNA_2671 0.22 -3.2
727,099 + 11039 mRNA_2671 0.23 -0.8
727,186 - 11039 mRNA_2671 0.26 -2.7
727,484 + 11039 mRNA_2671 0.35 -2.4
727,816 - 11039 mRNA_2671 0.44 -2.7
727,933 + 11039 mRNA_2671 0.48 -1.8
728,039 - 11039 mRNA_2671 0.51 -0.5
728,053 - 11039 mRNA_2671 0.51 -2.0
728,078 + 11039 mRNA_2671 0.52 -1.3
728,416 + 11039 mRNA_2671 0.62 -0.8
728,511 - 11039 mRNA_2671 0.65 0.5
728,802 - 11039 mRNA_2671 0.73 -1.7
729,527 + -1.2
729,665 + -1.0
729,703 + -3.5
729,785 - -0.3
729,799 + -0.1
729,956 - -0.2
729,959 - 0.6
729,968 - -0.5
729,969 + -2.2
729,970 + 0.0
729,999 - -2.0
730,001 - -1.2
730,013 + 2.5
730,013 + -2.4
730,087 - -0.9
730,112 - 0.1
730,119 + -0.1
730,122 - -0.1
730,144 - -0.3
730,146 - 0.6
730,146 - -0.1
730,147 + -0.1
730,152 - 1.3
730,152 + -0.9
730,167 + -1.4
730,172 - 1.6
730,185 + 1.1
730,213 + -0.3
730,213 + 1.2
730,287 + 1.0
730,300 + -0.6
730,309 + 0.2
730,323 + 0.5
730,330 - -0.3
730,340 + 0.7
730,470 - -0.2
730,472 - 2.3
730,473 - 1.6
730,476 - 0.7
730,484 - 1.2
730,497 + -0.2
730,504 + -2.6
730,505 + -1.1
730,507 - -0.7
730,618 - -1.9