Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2627

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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623,305 - 0.2
623,452 - 0.4
623,457 - -0.4
623,460 + -1.5
623,461 + -0.9
623,586 + 1.8
623,608 + -1.6
623,620 - -0.2
623,622 - 1.0
623,627 - -0.4
623,631 - 0.4
623,752 + 0.6
623,761 + 1.2
623,764 - -0.2
623,771 - 0.7
623,906 + -1.0
623,908 + -1.2
623,913 + -0.4
623,919 + 1.4
624,074 + -1.5
624,167 + -2.8
624,467 + 10995 mRNA_2627 0.20 1.1
624,787 + 10995 mRNA_2627 0.51 -1.0
624,787 + 10995 mRNA_2627 0.51 -0.1
624,797 + 10995 mRNA_2627 0.52 0.9
624,948 - 10995 mRNA_2627 0.66 0.1
625,525 + 0.6
625,526 + -0.1
625,531 + -2.3
625,652 - -1.3
625,658 - 0.3
625,663 + 1.4
625,675 + -0.1
625,692 + 0.3
625,816 - 1.7
625,821 + -1.9
625,831 + 1.2
625,942 - -0.2
626,101 + -0.7