Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2622

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613719 to 614794 10990 mRNA_2623: 10991 - K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase, at 615105 to 616887 10991

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
612,757 - 10989 mRNA_2621 0.69 1.6
612,769 - 10989 mRNA_2621 0.69 1.5
612,773 - 10989 mRNA_2621 0.70 1.8
613,053 - 10989 mRNA_2621 0.84 2.9
613,083 + 10989 mRNA_2621 0.85 0.7
613,213 - 2.2
613,369 - 0.9
613,463 - -0.9
613,465 - -1.3
613,466 + 0.1
613,480 - -1.4
613,514 + 0.6
613,514 - -0.1
613,516 - 0.2
613,521 + 1.0
613,530 + 1.9
613,658 + 0.6
613,788 - -1.2
613,865 + 10990 mRNA_2622 0.14 1.5
613,946 - 10990 mRNA_2622 0.21 0.2
614,053 + 10990 mRNA_2622 0.31 -0.1
614,539 - 10990 mRNA_2622 0.76 -0.1
614,679 - 10990 mRNA_2622 0.89 -0.6
614,828 + -0.9
614,845 + 0.4
614,968 - 0.9
615,035 + 0.2
615,040 + 1.3
615,141 + 2.2
615,147 - 1.1
615,158 + 1.0
615,160 - 1.0
615,166 - 1.6
615,174 + 0.3
615,313 - 10991 mRNA_2623 0.12 1.6
615,351 + 10991 mRNA_2623 0.14 -0.7
615,470 + 10991 mRNA_2623 0.20 -2.2
615,479 - 10991 mRNA_2623 0.21 -0.3
615,739 - 10991 mRNA_2623 0.36 1.0
615,764 + 10991 mRNA_2623 0.37 0.0
615,766 + 10991 mRNA_2623 0.37 -0.3