Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2610

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2609: 10977 - Hypothetical Protein, at 588972 to 589930 10977 mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590070 to 590802 10978 mRNA_2611: 10979 - BLAST phosphatase iiic [Colletotrichum gloeosporioides ..., at 591297 to 591714 10979

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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589,112 + 10977 mRNA_2609 0.15 2.1
589,319 - 10977 mRNA_2609 0.36 0.2
589,423 + 10977 mRNA_2609 0.47 0.3
589,424 - 10977 mRNA_2609 0.47 1.6
589,531 + 10977 mRNA_2609 0.58 -0.9
589,709 - 10977 mRNA_2609 0.77 0.1
589,719 + 10977 mRNA_2609 0.78 0.1
589,748 - 10977 mRNA_2609 0.81 0.4
589,857 + -1.3
590,272 - 10978 mRNA_2610 0.28 -0.4
590,403 - 10978 mRNA_2610 0.45 0.3
590,557 + 10978 mRNA_2610 0.66 -0.3
590,692 - 10978 mRNA_2610 0.85 2.3
590,845 - 0.0
590,848 + -0.1
590,861 + -0.2
590,869 + 2.5
590,888 - -2.0
591,000 + -0.2
591,002 + -0.9
591,134 + 0.3
591,150 - 0.2
591,345 - 10979 mRNA_2611 0.11 -1.0
591,453 + 10979 mRNA_2611 0.37 -0.3