Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2577

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2576: 10944 - Hypothetical Protein, at 480885 to 482213 10944 mRNA_2577: 10945 - HMMPfam-Protein of unknown function (DUF3767)-PF12597, at 482367 to 483175 10945 mRNA_2578: 10946 - KOG3574 Acetyl-CoA transporter, at 483636 to 486060 10946

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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481,527 - 10944 mRNA_2576 0.48 1.5
481,967 + 10944 mRNA_2576 0.81 -0.7
482,058 - 10944 mRNA_2576 0.88 0.2
482,072 + 10944 mRNA_2576 0.89 1.4
482,330 + -0.4
482,369 + 0.8
482,372 - -1.4
482,479 - 10945 mRNA_2577 0.14 -1.6
483,222 + -0.8
483,389 - 0.5
483,527 + -0.1
483,629 + -1.1
483,887 - 10946 mRNA_2578 0.10 2.2
484,079 - 10946 mRNA_2578 0.18 0.5
484,120 - 10946 mRNA_2578 0.20 2.8