Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2561

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2561: 10929 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 446568 to 451968 10929 mRNA_2562: 10930 - Hypothetical Protein, at 452219 to 453821 10930

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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445,648 - 0.4
445,703 - 1.2
445,712 - -1.2
445,724 + 0.8
445,734 + 0.1
445,778 + 0.0
445,780 + -0.5
445,786 + -0.7
445,792 + -0.8
445,806 - -1.0
445,813 - -2.3
445,861 - -1.4
445,863 + -1.3
445,867 + 0.5
445,875 + -1.4
445,875 + -0.4
445,876 + 1.0
445,876 + -0.2
445,877 - -0.9
445,899 - 1.1
445,903 + -2.0
445,921 - -1.1
445,940 - 0.6
445,943 - -0.2
446,025 - -0.9
446,075 - -0.9
446,075 - 1.4
446,079 + 0.4
446,080 + -0.5
446,089 - -0.6
446,142 + -0.5
446,158 + 0.5
446,158 - 1.5
446,163 - 1.4
446,163 - 0.8
446,164 + 1.1
446,164 - 0.3
446,164 + 1.7
446,165 - 0.7
446,165 + -0.2
446,167 - 0.7
446,176 + 0.5
446,180 - 1.4
446,223 + 0.3
446,312 - 1.5
446,334 - 0.4
446,346 - 0.3
446,463 - 0.5
446,465 - -2.6
446,473 + -1.4
446,478 - 0.9
446,491 + -2.6
446,614 + -1.5
446,646 - 0.8
446,793 + 3.0
446,793 - -0.7
446,796 - 0.4
446,804 + -0.7
447,080 - -1.4
447,253 - 10929 mRNA_2561 0.13 -1.4
447,695 - 10929 mRNA_2561 0.21 -0.6
447,859 - 10929 mRNA_2561 0.24 -0.9
448,233 - 10929 mRNA_2561 0.31 -0.4
448,747 + 10929 mRNA_2561 0.40 -0.6
448,849 - 10929 mRNA_2561 0.42 1.2
449,014 - 10929 mRNA_2561 0.45 -0.5
449,163 + 10929 mRNA_2561 0.48 -0.8
449,298 + 10929 mRNA_2561 0.51 0.9
449,303 - 10929 mRNA_2561 0.51 2.6
449,872 + 10929 mRNA_2561 0.61 -0.2
449,892 + 10929 mRNA_2561 0.62 2.0
449,912 - 10929 mRNA_2561 0.62 -0.8
450,033 + 10929 mRNA_2561 0.64 1.8
450,297 + 10929 mRNA_2561 0.69 0.0
450,310 + 10929 mRNA_2561 0.69 -0.4
450,388 + 10929 mRNA_2561 0.71 -1.9
450,656 + 10929 mRNA_2561 0.76 -0.2
450,893 + 10929 mRNA_2561 0.80 -1.4
451,082 + 10929 mRNA_2561 0.84 -0.3
451,093 + 10929 mRNA_2561 0.84 -0.7
451,097 - 10929 mRNA_2561 0.84 -0.3
452,291 - -0.6
452,449 + 10930 mRNA_2562 0.14 -1.0
452,453 - 10930 mRNA_2562 0.15 0.3
452,543 + 10930 mRNA_2562 0.20 0.2
452,606 + 10930 mRNA_2562 0.24 -0.3
452,704 - 10930 mRNA_2562 0.30 0.7
452,798 - 10930 mRNA_2562 0.36 1.6