Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2560

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927 mRNA_2560: 10928 - Hypothetical Protein, at 443128 to 444142 10928

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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442,679 + 2.0
442,759 - 0.3
442,765 + -0.4
442,852 - 0.9
442,983 - 0.7
443,070 + 1.2
443,223 - 0.4
443,336 - 10928 mRNA_2560 0.20 -0.1
443,388 + 10928 mRNA_2560 0.26 -0.3
443,414 - 10928 mRNA_2560 0.28 0.3
443,642 - 10928 mRNA_2560 0.51 -1.5
443,650 + 10928 mRNA_2560 0.51 -2.2
443,823 - 10928 mRNA_2560 0.68 2.2
443,939 - 10928 mRNA_2560 0.80 -2.0
443,942 + 10928 mRNA_2560 0.80 -2.8
444,401 - -0.9
444,623 + -0.4
444,631 - 0.7
444,708 - 0.2
444,799 - -0.2
444,820 - -1.3
444,834 - 0.2
444,882 - -0.6
444,944 + 0.2
444,975 - 0.5
445,002 - -1.8
445,081 - 0.8
445,094 - -0.3
445,111 - -0.2
445,116 - -1.0
445,120 - -0.0