Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2557

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2556: 10924 - Hypothetical Protein, at 435593 to 437275 10924 mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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436,575 - 10924 mRNA_2556 0.58 0.6
436,757 - 10924 mRNA_2556 0.69 -0.9
437,054 - 10924 mRNA_2556 0.87 -0.1
437,175 + 0.7
437,449 + -0.2
437,521 + -0.9
438,247 - 10925 mRNA_2557 0.38 0.3
438,247 - 10925 mRNA_2557 0.38 0.4
438,253 + 10925 mRNA_2557 0.39 -1.2
438,253 + 10925 mRNA_2557 0.39 -1.7
438,253 - 10925 mRNA_2557 0.39 0.5
438,319 - 10925 mRNA_2557 0.42 0.0
438,575 - 10925 mRNA_2557 0.57 0.4
438,662 - 10925 mRNA_2557 0.62 0.3
438,832 - 10925 mRNA_2557 0.71 -0.5
438,962 - 10925 mRNA_2557 0.78 -0.5
439,070 - 10925 mRNA_2557 0.84 0.1
439,070 - 10925 mRNA_2557 0.84 0.2
439,273 - 1.9
439,301 - 0.3
439,994 + 10926 mRNA_2558 0.41 1.6
440,130 - 10926 mRNA_2558 0.52 0.2