Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2552

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920 mRNA_2553: 10921 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 428822 to 431100 10921

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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427,455 + 2.3
427,482 - -1.2
427,493 - 1.4
427,494 - -1.1
427,507 + 0.2
427,516 - 0.2
427,625 - 0.7
427,744 - -2.4
427,756 - 0.9
427,756 - -2.6
427,761 + -0.3
427,779 - 0.4
427,783 - 0.6
427,795 + -0.2
428,026 + -3.7
428,040 + -0.4
428,086 + 0.7
428,105 - 0.8
428,121 - 0.3
428,237 - 10920 mRNA_2552 0.25 1.0
428,265 + 10920 mRNA_2552 0.29 -1.4
428,265 - 10920 mRNA_2552 0.29 0.1
428,384 - 10920 mRNA_2552 0.48 -0.4
428,437 + 10920 mRNA_2552 0.56 0.7
428,553 + 10920 mRNA_2552 0.75 0.2
428,567 + 10920 mRNA_2552 0.77 0.6
428,821 + -0.2
429,016 - 0.5
429,264 - 10921 mRNA_2553 0.19 -0.1
429,270 - 10921 mRNA_2553 0.20 -1.4
429,319 - 10921 mRNA_2553 0.22 -0.9
429,520 - 10921 mRNA_2553 0.31 1.1
429,577 - 10921 mRNA_2553 0.33 0.7