Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2532

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900 mRNA_2533: 10901 - K10706 SETX, ALS4 senataxin, at 377456 to 384141 10901

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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374,774 + 10899 mRNA_2531 0.80 2.1
375,306 + 0.6
375,339 + 0.3
375,345 - -0.2
375,473 - -2.7
375,501 + -0.4
375,506 + -0.9
375,561 - -0.7
376,774 + 10900 mRNA_2532 0.73 -0.4
376,809 + 10900 mRNA_2532 0.76 0.4
377,103 + -0.1
377,194 - 0.3
377,214 + 1.8
377,248 - -0.2
377,275 - -0.4
377,475 - -0.4
377,549 - -2.9
377,569 + 0.2
377,841 - 0.6
377,960 - 2.3
378,173 + 10901 mRNA_2533 0.11 1.5