Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2522

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346896 to 348680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351016 to 351939 10891

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
348,269 - 10889 mRNA_2521 0.77 1.0
348,617 + -0.1
348,680 + 0.8
348,709 + 0.2
348,713 - 1.0
348,724 - -0.4
348,747 - 1.7
348,748 + 1.1
348,748 + 2.2
348,749 + 0.3
348,752 + -0.2
348,763 - -0.5
348,776 + 1.2
348,778 - 0.3
348,805 + 1.3
348,841 + -0.2
348,855 + 0.2
348,857 - -3.6
348,859 - -0.5
348,860 + 0.7
348,864 + -0.3
348,866 - -0.4
348,868 - -0.2
348,869 + -0.7
348,869 + -0.7
348,894 - 0.5
348,896 - -0.3
348,900 + 0.2
348,901 + 1.6
348,902 + -0.2
348,904 + -0.6
348,931 + -1.2
348,991 - 10890 mRNA_2522 0.12 -0.6
348,998 - 10890 mRNA_2522 0.13 -0.4
349,012 - 10890 mRNA_2522 0.14 0.7
349,012 - 10890 mRNA_2522 0.14 0.9
349,023 - 10890 mRNA_2522 0.14 -0.4
349,031 - 10890 mRNA_2522 0.15 0.3
349,044 + 10890 mRNA_2522 0.16 2.0
349,068 - 10890 mRNA_2522 0.18 -1.3
349,181 + 10890 mRNA_2522 0.27 0.1
349,208 - 10890 mRNA_2522 0.29 0.0
349,210 + 10890 mRNA_2522 0.29 0.4
349,380 + 10890 mRNA_2522 0.42 -0.2
349,512 + 10890 mRNA_2522 0.52 1.6
349,627 - 10890 mRNA_2522 0.61 -0.5
349,913 + 10890 mRNA_2522 0.83 -1.3
349,931 - 10890 mRNA_2522 0.84 1.1
349,936 + 10890 mRNA_2522 0.85 -0.0
350,418 + -0.6
350,591 + 0.9
350,629 - 0.3
350,686 + 2.2
350,951 - -1.3