Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2501

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2500: 10868 - Hypothetical Protein, at 299018 to 301561 10868 mRNA_2501: 10869 - K00852 rbsK, RBKS ribokinase, at 301795 to 303224 10869 mRNA_2502: 10870 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 303475 to 306650 10870

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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300,815 - 10868 mRNA_2500 0.71 -0.2
300,845 + 10868 mRNA_2500 0.72 0.6
301,417 - -1.0
301,431 + 0.4
301,587 + 1.8
301,714 - -0.7
301,853 - -0.4
301,996 + 10869 mRNA_2501 0.14 0.8
302,133 + 10869 mRNA_2501 0.24 -2.1
302,255 + 10869 mRNA_2501 0.32 -1.8
302,418 - 10869 mRNA_2501 0.44 0.3
302,896 + 10869 mRNA_2501 0.77 -0.3
303,033 + 10869 mRNA_2501 0.87 -1.8
303,064 - 10869 mRNA_2501 0.89 0.9
303,386 + 1.3
303,454 - -1.0
303,504 + 1.1
304,082 - 10870 mRNA_2502 0.19 -1.3