Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2488

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2488: 10856 - KOG1804 RNA helicase, at 267770 to 269827 10856 mRNA_2489: 10857 - HMMPfam-Surfeit locus protein 5 subunit 22 of Mediator complex-PF06179, at 270221 to 270948 10857

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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266,850 - 1.2
267,068 - -1.5
267,476 - 0.1
267,563 + 0.3
267,860 - 1.2
267,971 - 1.3
268,107 + 10856 mRNA_2488 0.16 1.7
268,244 - 10856 mRNA_2488 0.23 1.3
268,515 - 10856 mRNA_2488 0.36 0.2
268,562 + 10856 mRNA_2488 0.38 -1.6
268,568 - 10856 mRNA_2488 0.39 0.4
268,869 - 10856 mRNA_2488 0.53 0.1
268,969 - 10856 mRNA_2488 0.58 1.2
268,997 - 10856 mRNA_2488 0.60 -2.0
269,100 + 10856 mRNA_2488 0.65 -0.4
269,225 - 10856 mRNA_2488 0.71 -1.0
269,389 + 10856 mRNA_2488 0.79 -1.2
269,405 - 10856 mRNA_2488 0.79 0.6
269,485 + 10856 mRNA_2488 0.83 0.3
269,537 - 10856 mRNA_2488 0.86 0.1
269,823 + 0.6
269,829 - 0.5
269,833 + -0.0
269,888 + -2.5
270,107 - -0.1
270,182 + -0.7