Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2483

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252498 to 254224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254371 to 257459 10851 mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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253,402 - 10850 mRNA_2482 0.52 -0.3
253,412 + 10850 mRNA_2482 0.53 -2.0
253,430 + 10850 mRNA_2482 0.54 -0.3
253,557 - 10850 mRNA_2482 0.61 0.8
253,684 + 10850 mRNA_2482 0.69 -2.0
253,859 - 10850 mRNA_2482 0.79 -0.9
253,981 - 10850 mRNA_2482 0.86 -0.2
253,986 + 10850 mRNA_2482 0.86 0.4
253,986 + 10850 mRNA_2482 0.86 -0.4
253,994 - 10850 mRNA_2482 0.87 -0.4
254,036 + 10850 mRNA_2482 0.89 -0.7
254,147 - 0.4
254,149 - -0.3
254,303 + 1.3
254,307 + 0.2
254,318 - 0.1
254,458 - -0.1
254,715 - 10851 mRNA_2483 0.11 -0.5
254,721 - 10851 mRNA_2483 0.11 -1.0
254,742 - 10851 mRNA_2483 0.12 0.3
254,751 + 10851 mRNA_2483 0.12 -0.6
254,871 + 10851 mRNA_2483 0.16 1.4
255,057 - 10851 mRNA_2483 0.22 -1.0
255,058 + 10851 mRNA_2483 0.22 -0.4
255,316 - 10851 mRNA_2483 0.31 -1.3
255,467 - 10851 mRNA_2483 0.35 -0.7
255,570 + 10851 mRNA_2483 0.39 0.4
255,576 + 10851 mRNA_2483 0.39 0.2
255,651 + 10851 mRNA_2483 0.41 -1.0
255,916 - 10851 mRNA_2483 0.50 -1.0
256,042 + 10851 mRNA_2483 0.54 -0.8
256,396 + 10851 mRNA_2483 0.66 1.8
256,984 + 10851 mRNA_2483 0.85 -0.5
257,231 - -0.4
257,233 + 0.4
257,525 + 0.7
257,831 - -0.2
257,935 + 0.4
257,937 - 2.1
258,018 + -0.1