Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2475

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234258 to 235956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236278 to 238719 10843

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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235,296 - 10842 mRNA_2474 0.61 0.4
235,303 - 10842 mRNA_2474 0.62 2.2
235,346 + 10842 mRNA_2474 0.64 2.1
235,725 - 10842 mRNA_2474 0.86 -2.9
235,738 - 10842 mRNA_2474 0.87 1.2
236,183 - 0.0
236,291 + -2.1
236,410 - -0.6
236,472 - 1.5
236,473 + -0.3
236,488 + -0.6
236,843 - 10843 mRNA_2475 0.23 1.0
237,037 - 10843 mRNA_2475 0.31 -0.9
237,445 + 10843 mRNA_2475 0.48 -1.1
237,697 - 10843 mRNA_2475 0.58 -0.8
238,079 - 10843 mRNA_2475 0.74 -2.5
238,132 + 10843 mRNA_2475 0.76 -0.1
238,338 + 10843 mRNA_2475 0.84 0.4
238,589 - -0.4
238,589 - 0.8
238,647 + 0.3
238,648 - -0.2
238,948 - -0.1
238,993 + 0.3
239,035 - -0.1
239,047 - 0.4
239,300 + -1.9