Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2440

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132736 to 133822 10807 mRNA_2440: 10808 - Hypothetical Protein, at 134243 to 137592 10808 mRNA_2441: 10809 - KOG1284 Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase, at 138011 to 140441 10809

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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133,604 + 10807 mRNA_2439 0.80 -0.4
134,606 + 10808 mRNA_2440 0.11 -1.2
134,643 + 10808 mRNA_2440 0.12 0.2
134,780 + 10808 mRNA_2440 0.16 -0.1
135,115 + 10808 mRNA_2440 0.26 0.2
135,242 - 10808 mRNA_2440 0.30 -0.6
135,245 + 10808 mRNA_2440 0.30 0.5
135,248 + 10808 mRNA_2440 0.30 -0.9
135,368 + 10808 mRNA_2440 0.34 0.1
135,526 - 10808 mRNA_2440 0.38 0.3
135,664 - 10808 mRNA_2440 0.42 -2.0
135,684 + 10808 mRNA_2440 0.43 -0.6
135,989 - 10808 mRNA_2440 0.52 0.1
136,219 - 10808 mRNA_2440 0.59 0.7
137,697 - 0.8
138,025 + -0.5
138,322 + 10809 mRNA_2441 0.13 -1.1