Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2435

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2434: 10802 - HMMPfam-ATP synthase subunit H-PF05493, at 119507 to 119841 10802 mRNA_2435: 10803 - Hypothetical Protein, at 120809 to 121330 10803 mRNA_2436: 10804 - KOG0254 Predicted transporter (major facilitator superfamily), at 121607 to 125074 10804

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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119,955 - -0.6
119,976 + 0.9
120,100 - -0.7
120,135 + 0.3
120,258 - 0.9
120,274 + -0.4
120,398 + -1.6
120,577 + 0.1
120,683 - -0.1
120,725 + -1.1
120,811 - 0.1
120,819 - 0.2
120,841 + 0.4
120,896 - 10803 mRNA_2435 0.17 -0.1
120,918 - 10803 mRNA_2435 0.21 -0.2
120,920 + 10803 mRNA_2435 0.21 0.5
120,921 + 10803 mRNA_2435 0.21 -1.4
120,925 - 10803 mRNA_2435 0.22 1.8
120,929 - 10803 mRNA_2435 0.23 0.6
120,933 + 10803 mRNA_2435 0.24 -1.3
120,980 - 10803 mRNA_2435 0.33 0.4
120,980 + 10803 mRNA_2435 0.33 -0.9
120,981 - 10803 mRNA_2435 0.33 0.5
120,982 + 10803 mRNA_2435 0.33 -0.2
120,983 - 10803 mRNA_2435 0.33 -1.8
120,983 + 10803 mRNA_2435 0.33 -0.8
121,183 - 10803 mRNA_2435 0.72 0.2
121,190 + 10803 mRNA_2435 0.73 -2.1
121,228 + 10803 mRNA_2435 0.80 -1.5
121,234 + 10803 mRNA_2435 0.81 -0.0
121,242 + 10803 mRNA_2435 0.83 0.3
121,247 - 10803 mRNA_2435 0.84 0.3
121,256 + 10803 mRNA_2435 0.86 0.1
121,257 + 10803 mRNA_2435 0.86 -3.7
121,261 + 10803 mRNA_2435 0.87 -2.0
121,270 - 10803 mRNA_2435 0.88 -1.4
121,276 + 10803 mRNA_2435 0.89 -0.7
121,283 - 0.3
121,287 + -1.6
121,306 + 0.3
121,308 + 0.2
121,338 + -0.0
121,340 - -0.9
121,362 - -1.5
121,401 - -1.4
121,416 + -1.8
121,416 + -0.9
121,417 - -0.3
121,461 + -0.7
121,462 + -1.2
121,462 - 0.9
121,497 + 0.3
121,516 + -0.7
121,522 - -1.5
121,538 - -1.5
121,558 - -0.3
121,560 - 2.1
121,562 + -0.2
121,605 - 1.8
121,606 + -0.7
121,608 + -1.1
121,615 - -1.0
121,620 + -0.5
121,708 - -0.3
121,725 - 0.0
121,727 + -0.2
121,739 - 0.2
121,742 + -1.6
122,306 - 10804 mRNA_2436 0.20 1.5