Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2432

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2431: 10799 - Hypothetical Protein, at 109919 to 110380 10799 mRNA_2432: 10800 - K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20, at 111348 to 112998 10800 mRNA_2433: 10801 - K10866 RAD50 DNA repair protein RAD50, at 113156 to 118783 10801

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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110,586 + 3.1
110,764 + -1.0
110,933 + -1.7
110,965 - -0.0
110,985 - 2.5
110,994 - -0.5
111,014 + 0.0
111,139 + 0.2
111,148 + -0.6
111,163 - -0.6
111,169 - -1.3
111,169 + -1.1
111,183 + -0.6
111,319 - -0.5
111,324 + -1.3
111,628 - 10800 mRNA_2432 0.17 -1.9
111,727 - 10800 mRNA_2432 0.23 -1.6
111,921 + 10800 mRNA_2432 0.35 -1.7
112,029 + 10800 mRNA_2432 0.41 -2.6
112,458 - 10800 mRNA_2432 0.67 0.5
112,605 + 10800 mRNA_2432 0.76 0.9
113,013 - -0.2
113,893 - 10801 mRNA_2433 0.13 -1.8