Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2417

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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74,016 + 10784 mRNA_2416 0.76 0.9
74,257 + 10784 mRNA_2416 0.85 -0.3
74,478 + 0.2
74,481 + 0.4
74,542 - 1.4
74,605 + -0.7
74,777 - -0.4
75,237 + 10785 mRNA_2417 0.34 -0.5
75,400 + 10785 mRNA_2417 0.46 0.8
75,428 + 10785 mRNA_2417 0.48 -0.2
75,987 - -0.0
76,075 - 0.8
76,116 - -0.5
76,120 - 0.4
76,168 - 1.2
76,252 - 1.9
76,258 - 0.7
76,267 + -1.1
76,425 - 0.4
76,446 + 0.6
76,447 - 0.9
76,460 + 1.3
76,557 - -0.3
76,594 - -2.1
76,974 + 0.4