Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2410

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2409: 10777 - Hypothetical Protein, at 56909 to 58334 10777 mRNA_2410: 10778 - Hypothetical Protein, at 59167 to 60066 10778 mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60970 to 61863 10779

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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58,412 + 0.6
58,445 + 0.4
58,542 + -0.8
58,691 - 0.0
58,699 + 0.2
58,699 - 1.0
58,824 - 0.2
58,851 - 1.9
58,935 - -0.6
58,999 - 1.0
59,010 + 0.2
59,017 - -0.8
59,028 + -0.5
59,035 + -1.8
59,042 + -0.3
59,054 - -0.4
59,153 - 0.7
59,154 + 0.0
59,162 + -2.2
59,170 - 0.5
59,304 + 10778 mRNA_2410 0.15 1.2
59,323 + 10778 mRNA_2410 0.17 1.8
59,561 + 10778 mRNA_2410 0.44 0.8
59,592 + 10778 mRNA_2410 0.47 0.8
59,669 - 10778 mRNA_2410 0.56 -0.1
59,736 - 10778 mRNA_2410 0.63 2.5
59,860 - 10778 mRNA_2410 0.77 0.4
59,882 - 10778 mRNA_2410 0.79 0.4
59,891 + 10778 mRNA_2410 0.80 0.5
59,894 - 10778 mRNA_2410 0.81 -1.1
60,075 - -0.6
60,303 - 1.4
60,991 + -1.1
61,017 + -1.1
61,021 + -1.5