Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2378

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2377: 10745 - KOG0725 Reductases with broad range of substrate specificities, at 751815 to 752999 10745 mRNA_2378: 10746 - Hypothetical Protein, at 753983 to 754459 10746 mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754598 to 756012 10747

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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753,056 - 0.6
753,495 + -0.2
753,495 + -2.3
753,637 - 0.5
754,184 + 10746 mRNA_2378 0.42 2.3
754,363 - 10746 mRNA_2378 0.80 1.4
754,365 - 10746 mRNA_2378 0.80 1.4
754,536 - -0.1
754,564 - -0.6
754,571 + 1.1
754,816 + 10747 mRNA_2379 0.15 1.2
755,360 + 10747 mRNA_2379 0.54 0.3
755,375 + 10747 mRNA_2379 0.55 0.4
755,397 + 10747 mRNA_2379 0.56 1.7