Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2346

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2345: 10713 - KOG1399 Flavin-containing monooxygenase, at 672144 to 674998 10713 mRNA_2346: 10714 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 675723 to 677238 10714 mRNA_2347: 10715 - K09207 KLF6_7 krueppel-like factor 6/7, at 677617 to 679955 10715

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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675,136 + -1.6
675,291 + -0.5
675,617 - 0.5
676,320 + 10714 mRNA_2346 0.39 1.0
676,724 - 10714 mRNA_2346 0.66 0.3
676,836 - 10714 mRNA_2346 0.73 1.1
676,851 + 10714 mRNA_2346 0.74 1.4
677,005 - 10714 mRNA_2346 0.85 2.4
677,034 - 10714 mRNA_2346 0.86 0.7
677,034 - 10714 mRNA_2346 0.86 1.7
677,312 - 0.4
677,322 - 0.4
677,333 + 1.8
677,341 + -0.2
677,365 + -1.9
677,485 - -0.3
677,499 - -0.4
677,655 - -0.4
677,830 + -0.0