Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2287

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2286: 10654 - Hypothetical Protein, at 528229 to 530268 10654 mRNA_2287: 10655 - KOG3870 Uncharacterized conserved protein, at 531212 to 533990 10655

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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530,363 - 2.5
530,368 - 0.5
530,372 + 2.4
530,391 + 0.4
530,486 - -1.1
530,562 - -0.6
530,575 + 0.7
530,592 - -0.7
530,601 + -0.9
530,610 + -0.5
530,613 - -0.4
530,639 - -0.9
530,639 + 0.1
530,652 + -0.7
530,678 + -0.4
530,684 + -0.3
530,708 + 0.4
530,714 + 0.2
530,714 + -0.3
530,726 - -0.0
530,727 - -1.3
530,727 + -0.7
530,728 + 1.3
530,771 - 0.1
530,824 - -0.7
530,835 + 0.2
530,840 - -1.2
530,898 + 0.2
530,899 - 1.7
530,900 - 1.2
530,900 - 2.4
530,904 + 0.4
530,904 + 0.3
530,904 - 2.0
530,905 + -1.3
530,911 - -0.4
530,914 + -2.0
530,923 + 0.3
530,923 - 0.5
530,923 + -0.0
530,923 - 0.4
530,928 - -1.0
530,929 + 1.6
530,929 + -0.2
530,930 + 1.3
530,932 - -0.7
530,933 + -0.9
530,934 - -0.7
530,939 - -0.6
530,944 + 0.1
530,945 + 0.1
530,945 + 0.8
530,952 - 1.7
530,958 + 2.3
530,959 + 0.5
530,961 - -1.4
530,967 + 1.2
531,036 + 1.1
531,059 - 3.7
531,061 + -1.9
531,070 - 0.6
531,097 + 2.3
531,101 - 0.7
531,109 + -0.8
531,117 + 0.1
531,117 - 1.1
531,121 + -0.7
531,126 + 0.8
531,129 + 0.2
531,132 + 0.2
531,199 - 0.6
531,261 + 1.4
531,264 - -0.0
531,274 + -0.4
531,280 + -0.2
531,411 - 2.2
531,418 - -1.0
531,420 - 0.4
531,446 + 0.3
532,015 + 10655 mRNA_2287 0.29 0.9
532,026 - 10655 mRNA_2287 0.29 0.4
532,430 + 10655 mRNA_2287 0.44 -0.9
532,434 + 10655 mRNA_2287 0.44 -0.2
532,462 - 10655 mRNA_2287 0.45 1.5
532,590 - 10655 mRNA_2287 0.50 0.1
532,760 - 10655 mRNA_2287 0.56 0.2
532,878 + 10655 mRNA_2287 0.60 -0.4
533,307 + 10655 mRNA_2287 0.75 1.3
533,727 + -1.0
533,733 + -0.2
533,734 - -0.3
533,891 - 1.8
534,036 + -0.1
534,784 + -0.2