Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2226

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2225: 10593 - Hypothetical Protein, at 403974 to 404899 10593 mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405486 to 409218 10594 mRNA_2227: 10595 - K12392 AP1B1 AP-1 complex subunit beta-1, at 409342 to 412255 10595

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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404,631 + 10593 mRNA_2225 0.71 0.1
404,634 - 10593 mRNA_2225 0.71 -0.6
404,671 + 10593 mRNA_2225 0.75 1.4
405,099 + -0.7
405,199 - -0.1
405,356 - 1.5
405,358 + -0.1
405,368 - -2.8
405,372 + -1.0
405,395 + 0.4
405,674 - -0.6
405,801 - 1.3
406,131 - 10594 mRNA_2226 0.17 1.3
406,272 + 10594 mRNA_2226 0.21 -0.3
406,551 - 10594 mRNA_2226 0.29 -1.4
406,563 + 10594 mRNA_2226 0.29 -1.2
407,119 - 10594 mRNA_2226 0.44 -1.5
407,276 - 10594 mRNA_2226 0.48 -1.4
409,228 - 0.3
409,239 + 0.7
409,361 - 0.0
409,364 - -0.1
409,897 + 10595 mRNA_2227 0.19 -2.1
409,919 + 10595 mRNA_2227 0.20 2.5