Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2219

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2218: 10586 - SUPERFAMILY--SSF52047, at 384694 to 386223 10586 mRNA_2219: 10587 - Hypothetical Protein, at 386723 to 388300 10587 mRNA_2220: 10588 - K14411 MSI RNA-binding protein Musashi, at 388707 to 390951 10588

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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385,734 + 10586 mRNA_2218 0.68 0.5
385,912 + 10586 mRNA_2218 0.80 -1.0
386,072 + 0.1
386,072 + -0.2
386,307 - -1.3
386,325 + -0.1
386,337 + 1.0
386,498 + 0.5
386,780 + -0.1
386,960 - 10587 mRNA_2219 0.15 -0.4
387,063 - 10587 mRNA_2219 0.22 0.6
387,216 - 10587 mRNA_2219 0.31 0.2
387,358 - 10587 mRNA_2219 0.40 1.7
387,458 - 10587 mRNA_2219 0.47 0.3
387,783 - 10587 mRNA_2219 0.67 -0.6
387,800 + 10587 mRNA_2219 0.68 1.5
388,047 - 10587 mRNA_2219 0.84 -0.8
388,123 + 10587 mRNA_2219 0.89 0.9
388,227 - -0.2
388,229 + 0.4
388,235 - 0.3
388,242 + 1.7
388,408 - 0.6
388,533 + 0.8
388,665 - -1.3