Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2174

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252684 to 253574 10541 mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254027 to 255180 10542 mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255474 to 261372 10543

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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253,488 - -0.1
253,623 + -0.2
254,393 + 10542 mRNA_2174 0.32 0.5
254,503 - 10542 mRNA_2174 0.41 -1.4
254,530 + 10542 mRNA_2174 0.44 -0.6
254,560 - 10542 mRNA_2174 0.46 0.0
254,566 - 10542 mRNA_2174 0.47 -3.3
254,705 + 10542 mRNA_2174 0.59 0.2
254,779 - 10542 mRNA_2174 0.65 -0.0
254,932 + 10542 mRNA_2174 0.78 -0.1
254,933 - 10542 mRNA_2174 0.79 0.5
254,938 - 10542 mRNA_2174 0.79 -1.0
254,946 + 10542 mRNA_2174 0.80 -0.6
254,955 + 10542 mRNA_2174 0.80 -0.2
255,100 - -0.2
255,208 + -0.3
255,246 - -2.5
255,251 + 0.6
255,281 - 1.3
255,415 - 0.2
255,845 - -0.9