Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2148

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187353 to 188300 10515 mRNA_2148: 10516 - KOG2490 Predicted membrane protein, at 188421 to 191027 10516 mRNA_2149: 10517 - K12948 SPCS3, SPC3 signal peptidase complex subunit 3, at 191152 to 191850 10517

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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188,309 + 1.2
188,392 + -1.1
188,393 + 1.0
188,675 + 1.1
189,740 + 10516 mRNA_2148 0.51 1.2
189,923 - 10516 mRNA_2148 0.58 0.2
189,965 - 10516 mRNA_2148 0.59 -0.2
189,986 - 10516 mRNA_2148 0.60 1.0
190,052 + 10516 mRNA_2148 0.63 -1.4
190,282 - 10516 mRNA_2148 0.71 2.6
190,398 + 10516 mRNA_2148 0.76 1.1
190,539 - 10516 mRNA_2148 0.81 -0.5
190,595 + 10516 mRNA_2148 0.83 -2.0
190,760 + 10516 mRNA_2148 0.90 0.4
190,853 + -0.1
190,891 + 2.8
191,024 - 1.5
191,042 + -1.9
191,043 + 0.8
191,056 - 0.4
191,132 - 0.5
191,205 + -1.6