Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2136

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150841 to 152742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153030 to 154707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155364 to 157707 10505

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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152,197 + 10503 mRNA_2135 0.71 -0.3
152,238 - 10503 mRNA_2135 0.73 0.2
152,282 + 10503 mRNA_2135 0.76 -0.8
152,360 - 10503 mRNA_2135 0.80 -0.3
152,650 + 0.7
152,654 - -1.1
152,664 - -0.0
152,690 - 0.0
152,693 + -0.2
152,700 + 0.3
152,764 + 1.8
152,808 - 0.5
153,117 - 0.0
153,269 + 10504 mRNA_2136 0.14 -0.5
153,307 - 10504 mRNA_2136 0.17 -0.9
153,666 - 10504 mRNA_2136 0.38 -2.4
153,673 - 10504 mRNA_2136 0.38 0.5
153,721 - 10504 mRNA_2136 0.41 -0.0
153,826 - 10504 mRNA_2136 0.47 0.1
153,833 + 10504 mRNA_2136 0.48 1.0
153,845 + 10504 mRNA_2136 0.49 -0.1
153,859 - 10504 mRNA_2136 0.49 0.2
153,866 + 10504 mRNA_2136 0.50 0.0
153,866 + 10504 mRNA_2136 0.50 -0.1
153,867 + 10504 mRNA_2136 0.50 0.3
153,966 - 10504 mRNA_2136 0.56 -1.6
153,984 - 10504 mRNA_2136 0.57 1.3
154,391 - 10504 mRNA_2136 0.81 -0.0
154,446 - 10504 mRNA_2136 0.84 -1.5
154,688 - 0.6
154,839 - 1.9
155,435 + -0.8
155,436 - -0.6
155,442 + 1.8
155,451 - -1.1
155,562 - 0.5