Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2121

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2120: 10488 - Hypothetical Protein, at 119780 to 121101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121585 to 123428 10489

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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120,636 - 10488 mRNA_2120 0.65 -2.4
120,766 + 10488 mRNA_2120 0.75 0.5
120,781 - 10488 mRNA_2120 0.76 0.0
120,785 - 10488 mRNA_2120 0.76 1.5
120,786 + 10488 mRNA_2120 0.76 -0.0
120,790 + 10488 mRNA_2120 0.76 -0.7
120,795 - 10488 mRNA_2120 0.77 1.2
120,798 - 10488 mRNA_2120 0.77 0.4
120,798 + 10488 mRNA_2120 0.77 -0.0
120,799 - 10488 mRNA_2120 0.77 -0.1
120,799 - 10488 mRNA_2120 0.77 1.0
120,803 + 10488 mRNA_2120 0.77 -0.6
120,805 - 10488 mRNA_2120 0.78 -0.0
120,806 + 10488 mRNA_2120 0.78 1.2
120,807 - 10488 mRNA_2120 0.78 1.3
120,808 + 10488 mRNA_2120 0.78 -0.8
120,810 + 10488 mRNA_2120 0.78 0.2
121,088 + -0.9
121,091 + 0.5
121,202 + 1.1
121,231 - -0.4
121,238 + -2.4
121,263 + 0.8
121,354 + -1.1
121,555 - -1.3
121,676 + -2.2
121,686 + 1.1
121,708 - -0.2
121,714 - -1.4
121,835 - 10489 mRNA_2121 0.14 -0.4
121,982 + 10489 mRNA_2121 0.22 0.1
122,132 - 10489 mRNA_2121 0.30 -3.0
122,136 - 10489 mRNA_2121 0.30 0.4
122,139 - 10489 mRNA_2121 0.30 0.2
122,316 + 10489 mRNA_2121 0.40 -0.8
123,150 + 10489 mRNA_2121 0.85 -0.7
123,150 + 10489 mRNA_2121 0.85 0.2
123,300 + 1.3
123,314 - 0.4
123,321 + 0.6
123,328 - 0.9
123,328 - 0.4
123,334 - -0.4
123,457 + 1.8
123,468 - -0.1
123,475 + 2.9
123,477 - -0.1
123,484 + 0.5
123,485 - 0.2
123,486 - 1.6
123,490 - 0.8
123,491 + 0.8
123,493 + 0.0
123,502 - 0.7
123,507 + -0.3
123,522 - 0.1
123,528 - 1.6
123,540 + -1.0
123,540 - 1.3
123,682 - -2.5
123,717 - -0.3
124,108 + -0.1
124,117 - -1.7
124,255 + -0.9
124,265 + 0.5
124,279 - 0.3
124,381 + 0.8
124,390 + 0.7
124,393 - 0.6
124,414 + 0.1
124,417 - -2.6
124,419 + 1.2
124,421 + -0.8
124,422 + -2.2
124,423 + 1.2