Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2101

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2100: 10468 - K13184 DHX9 ATP-dependent RNA helicase A, at 68093 to 72993 10468 mRNA_2101: 10469 - K12041 SLC9A6_7, NHE6_7 solute carrier family 9 (sodium/hydrogen exchanger), member 6/7, at 73173 to 76460 10469 mRNA_2102: 10470 - SUPERFAMILY--SSF53067, at 76785 to 80345 10470

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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73,021 + -0.3
73,102 + 2.5
73,231 - 0.5
73,733 + 10469 mRNA_2101 0.17 2.2
73,968 - 10469 mRNA_2101 0.24 -0.5
74,215 + 10469 mRNA_2101 0.32 1.1
74,306 - 10469 mRNA_2101 0.34 1.0
74,422 + 10469 mRNA_2101 0.38 -1.0
74,689 - 10469 mRNA_2101 0.46 4.1
75,869 - 10469 mRNA_2101 0.82 0.6
76,021 + 10469 mRNA_2101 0.87 -0.3
76,128 - 10469 mRNA_2101 0.90 0.4
76,551 - 1.0
76,703 + -2.1
76,919 + -0.5
76,927 + 0.7
77,013 + 0.3
77,206 + 10470 mRNA_2102 0.12 -0.7
77,264 + 10470 mRNA_2102 0.13 -0.9
77,337 + 10470 mRNA_2102 0.16 -0.5
77,390 + 10470 mRNA_2102 0.17 -2.8