Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2097

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2096: 10464 - K05754 ARPC5 actin related protein 2/3 complex, subunit 5, at 59907 to 60818 10464 mRNA_2097: 10465 - K03217 yidC, spoIIIJ, OXA1, ccfA YidC/Oxa1 family membrane protein insertase, at 61470 to 63350 10465 mRNA_2098: 10466 - Hypothetical Protein, at 63765 to 64899 10466

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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60,826 - -0.0
60,829 + 0.3
60,835 - 0.4
60,849 + -1.1
61,005 - 0.3
61,011 - 1.3
61,027 + 0.7
61,044 + -0.1
61,079 - -0.7
61,134 - -1.5
61,143 + 0.1
61,179 - 0.4
61,197 + 0.4
61,203 + 1.2
61,206 - 0.7
61,381 - -1.4
61,410 + -0.9
61,428 - 0.3
61,435 + -0.4
61,526 - -1.9
63,060 + 10465 mRNA_2097 0.85 0.4
63,318 + 0.7
63,600 + -1.0
63,613 + 0.6
63,642 - -0.4
63,717 - 0.1
63,804 + 0.2
63,889 - 10466 mRNA_2098 0.11 0.1
63,907 + 10466 mRNA_2098 0.13 -0.3
64,107 + 10466 mRNA_2098 0.30 0.5