Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2085

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2085: 10453 - BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu..., at 38392 to 39762 10453 mRNA_2086: 10454 - Hypothetical Protein, at 40220 to 41311 10454

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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37,481 - 0.3
37,483 + -0.1
37,492 - 1.2
37,496 + 0.4
37,513 - 0.9
37,569 + 0.2
37,615 + -0.7
37,615 - -1.8
37,631 + -0.2
37,635 - -1.6
37,638 + -0.7
37,639 + 0.5
37,640 - -0.3
37,644 + 0.3
37,830 - -1.1
37,837 + -1.2
37,846 + 0.1
37,923 + 0.4
37,940 + -0.7
37,940 - 0.8
38,103 - 0.1
38,227 - 0.3
38,943 - 10453 mRNA_2085 0.40 0.2
39,149 + 10453 mRNA_2085 0.55 -0.1
39,228 - 10453 mRNA_2085 0.61 0.6
39,379 - 10453 mRNA_2085 0.72 -1.1
39,675 - 0.8
40,069 + 1.2
40,077 - 0.4
40,209 - 1.1
40,228 + 0.5
40,312 + -0.8
40,315 - -0.2
40,695 + 10454 mRNA_2086 0.43 1.9
40,700 - 10454 mRNA_2086 0.44 -0.1
40,718 - 10454 mRNA_2086 0.46 -0.3
40,718 + 10454 mRNA_2086 0.46 0.7