Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2079

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2078: 10446 - K10773 NTH endonuclease III, at 20466 to 22211 10446 mRNA_2079: 10447 - Hypothetical Protein, at 22579 to 23856 10447

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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21,857 + 10446 mRNA_2078 0.80 0.8
21,860 + 10446 mRNA_2078 0.80 0.9
21,932 + 10446 mRNA_2078 0.84 -2.0
22,332 + -0.5
22,338 - -3.2
22,341 + 0.4
22,342 - 0.2
22,348 + 0.4
22,349 + 0.6
22,353 + 0.5
22,358 + -1.6
22,366 - -0.7
22,486 + -0.2
22,490 + 0.5
22,512 - -0.2
22,530 + -0.5
22,589 + -0.1
22,777 - 10447 mRNA_2079 0.15 0.1
22,817 - 10447 mRNA_2079 0.19 2.5
22,835 - 10447 mRNA_2079 0.20 0.7
23,494 - 10447 mRNA_2079 0.72 -1.5
23,729 - 0.8
23,876 - -0.1
24,184 - 1.5
24,197 + 1.9
24,491 - 0.0