Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2048

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2047: 10415 - HMMPfam-Spo12 family-PF05032, at 830118 to 830933 10415 mRNA_2048: 10416 - Hypothetical Protein, at 831282 to 832133 10416 mRNA_2049: 10417 - K07565 NIP7 60S ribosome subunit biogenesis protein NIP7, at 832844 to 834374 10417

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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830,939 + -2.2
831,203 - 0.4
831,209 + 1.0
831,320 + -0.8
831,321 - -0.6
831,331 - 0.9
831,372 - 10416 mRNA_2048 0.11 0.5
831,448 - 10416 mRNA_2048 0.19 -1.1
831,516 - 10416 mRNA_2048 0.27 0.4
831,649 + 10416 mRNA_2048 0.43 1.4
831,678 + 10416 mRNA_2048 0.46 2.8
831,729 + 10416 mRNA_2048 0.52 4.6
831,798 - 10416 mRNA_2048 0.61 0.1
832,078 + -0.0
832,081 - -0.2
832,216 - 0.4
832,220 - -0.7
832,661 - -0.9
832,845 - 2.1