Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2033

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794820 to 796212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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795,918 + 10400 mRNA_2032 0.79 2.0
796,025 + 10400 mRNA_2032 0.87 1.2
796,091 - 1.1
796,206 - 1.1
796,370 - -0.5
796,529 + 0.5
796,670 + 1.1
796,694 - -1.4
797,120 + 10401 mRNA_2033 0.14 -0.1
797,249 + 10401 mRNA_2033 0.22 -1.2
797,481 - 10401 mRNA_2033 0.36 -0.1
797,528 - 10401 mRNA_2033 0.39 -0.2
797,632 + 10401 mRNA_2033 0.45 0.6
798,125 + 10401 mRNA_2033 0.75 0.9
798,432 + 0.4
798,557 + 1.6
798,558 - 0.6
798,570 - -0.9
798,581 - 0.6
798,683 - 0.5
798,723 + -0.4
798,898 + 0.6
798,929 - -0.3
799,017 + 0.9
799,042 + 0.8
799,180 - 0.4
799,195 + -0.5
799,247 + 0.2
799,274 + 0.3
799,339 + 0.1
799,461 + 1.4
799,493 + 0.2
799,522 - 0.2