Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2005

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372 mRNA_2005: 10373 - K08286 E2.7.11.- protein-serine/threonine kinase, at 720750 to 723688 10373 mRNA_2006: 10374 - K00380 cysJ sulfite reductase (NADPH) flavoprotein alpha-component, at 724216 to 728973 10374

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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719,842 - -0.8
720,536 - 1.8
720,891 + 1.3
721,153 - 10373 mRNA_2005 0.14 0.4
721,868 - 10373 mRNA_2005 0.38 0.3
722,315 - 10373 mRNA_2005 0.53 -1.6
723,328 - 10373 mRNA_2005 0.88 0.1
723,454 + -0.3
723,485 - 1.0
723,496 - -1.9
723,500 + -1.2
723,594 - -0.9
723,628 + 1.9
723,648 - 0.8
723,650 + -0.4
723,655 + 0.9
723,755 - 0.2
723,760 + -0.2
723,768 - -0.3
723,768 - 0.9
723,777 - -0.3
723,778 + -1.8
723,781 + 3.5
723,829 + 0.6
723,838 + -0.7
723,843 - -0.9
723,852 + 0.9
723,862 + -0.6
723,863 - -0.5
723,993 - 0.2
723,997 - 0.3
724,061 + -0.1
724,068 - -0.4
724,073 + 0.7
724,101 + 2.0
724,111 - 0.3
724,195 - 1.7
724,208 - -0.3
724,213 - 1.3
724,226 - -0.0
724,229 + 2.6
724,233 - 1.2
724,235 + 0.7
724,245 - -0.3
724,247 - -0.8
724,518 - -2.8
724,547 + -1.9
724,575 + -1.9