Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1984

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1983: 10351 - K07213 ATOX1, ATX1, copZ, golB copper chaperone, at 670002 to 670488 10351 mRNA_1984: 10352 - Hypothetical Protein, at 670630 to 671905 10352 mRNA_1985: 10353 - Hypothetical Protein, at 672578 to 672870 10353

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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669,788 - 0.6
669,929 - 0.2
669,932 - -1.6
669,942 + -0.5
669,943 + 0.2
670,816 - 10352 mRNA_1984 0.15 -1.7
671,007 + 10352 mRNA_1984 0.30 -1.1
671,440 - 10352 mRNA_1984 0.63 0.3
671,566 + 10352 mRNA_1984 0.73 -1.2
671,679 - 10352 mRNA_1984 0.82 -0.4
671,735 + 10352 mRNA_1984 0.87 0.9
672,009 + -1.3
672,154 + -0.8
672,366 + -1.2
672,737 + 10353 mRNA_1985 0.54 1.1
672,887 + -0.5