Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1923

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518847 to 519239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071 10291 mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521294 to 523495 10292

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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518,611 - 10289 mRNA_1921 0.79 0.1
518,615 - 10289 mRNA_1921 0.80 3.6
518,936 - 10290 mRNA_1922 0.23 0.1
519,163 - 10290 mRNA_1922 0.80 0.5
519,377 - -3.3
519,674 + 10291 mRNA_1923 0.13 -0.0
520,262 - 10291 mRNA_1923 0.50 0.8
520,289 + 10291 mRNA_1923 0.51 -0.4
520,403 + 10291 mRNA_1923 0.59 1.2
520,562 + 10291 mRNA_1923 0.68 -0.3
520,961 - -0.6
520,987 + 0.6
521,109 - -0.1
521,119 + -0.1
521,123 - -0.8
521,274 + -1.2
521,278 + 0.6
521,286 + -0.2
521,318 + -1.3
521,432 + 1.5
521,435 - -0.8
521,482 + 0.5
521,567 - 10292 mRNA_1924 0.12 -0.4
521,726 - 10292 mRNA_1924 0.20 1.5
521,727 - 10292 mRNA_1924 0.20 0.1
521,757 + 10292 mRNA_1924 0.21 -1.5
521,995 + 10292 mRNA_1924 0.32 -0.2