Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1920

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1919: 10287 - K11340 ACTL6A, INO80K actin-like protein 6A, at 513454 to 515296 10287 mRNA_1920: 10288 - Hypothetical Protein, at 515602 to 517203 10288 mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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515,533 + 1.2
515,539 - 0.0
515,810 - 10288 mRNA_1920 0.13 0.9
515,954 + 10288 mRNA_1920 0.22 -1.5
516,274 - 10288 mRNA_1920 0.42 -0.7
516,825 + 10288 mRNA_1920 0.76 -0.7
517,127 + -1.3
517,400 + -0.4
517,416 + -1.7
517,456 + -0.0
517,484 + -0.6
517,496 + -0.2
517,509 + -0.3
517,511 + 0.5
517,520 - -0.1
517,526 - 0.6
517,533 - -0.5
517,540 - 0.1
517,541 - 1.7
517,553 - 0.0
517,606 - 1.5
517,738 + 0.3
518,026 + 10289 mRNA_1921 0.19 -0.3