Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1900

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1899: 10267 - K14946 RBFOX, FOX RNA binding protein fox-1, at 462869 to 464416 10267 mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464695 to 468117 10268 mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468442 to 470059 10269

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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463,748 - 10267 mRNA_1899 0.57 -0.9
463,748 - 10267 mRNA_1899 0.57 0.6
464,132 - 10267 mRNA_1899 0.82 -0.1
464,274 - -0.7
464,583 + 0.3
464,940 - -0.5
464,984 - 0.6
465,036 + 1.2
465,347 + 10268 mRNA_1900 0.19 -1.2
465,455 - 10268 mRNA_1900 0.22 0.8
465,753 + 10268 mRNA_1900 0.31 0.0
466,444 + 10268 mRNA_1900 0.51 1.0
467,341 - 10268 mRNA_1900 0.77 1.0
467,464 + 10268 mRNA_1900 0.81 -1.2
467,570 + 10268 mRNA_1900 0.84 1.8
467,590 + 10268 mRNA_1900 0.85 1.8
467,733 - 10268 mRNA_1900 0.89 0.7
468,105 - -0.3
468,209 + -0.7
468,247 - -0.0
468,373 - 0.9
468,375 + 1.6
468,382 + -0.2
468,383 - 0.4