Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1849

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1848: 10216 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 362950 to 364987 10216 mRNA_1849: 10217 - Hypothetical Protein, at 365239 to 367490 10217

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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364,241 - 10216 mRNA_1848 0.63 1.3
364,403 - 10216 mRNA_1848 0.71 0.4
364,535 + 10216 mRNA_1848 0.78 -0.6
364,576 + 10216 mRNA_1848 0.80 -1.4
364,707 + 10216 mRNA_1848 0.86 -1.7
364,868 - 1.7
364,878 + 0.6
365,167 + 1.7
365,610 + 10217 mRNA_1849 0.16 -0.2
365,819 - 10217 mRNA_1849 0.26 0.7
365,855 + 10217 mRNA_1849 0.27 0.3
366,005 - 10217 mRNA_1849 0.34 0.2
366,183 + 10217 mRNA_1849 0.42 -0.5
366,441 + 10217 mRNA_1849 0.53 -0.8
366,601 - 10217 mRNA_1849 0.60 0.8
366,740 - 10217 mRNA_1849 0.67 -0.0
366,868 - 10217 mRNA_1849 0.72 0.6
366,871 - 10217 mRNA_1849 0.72 0.6
366,885 + 10217 mRNA_1849 0.73 0.3
366,886 - 10217 mRNA_1849 0.73 0.1
366,895 + 10217 mRNA_1849 0.74 -0.1
366,999 + 10217 mRNA_1849 0.78 0.1
367,178 - 10217 mRNA_1849 0.86 -0.1
367,184 - 10217 mRNA_1849 0.86 0.1
367,186 - 10217 mRNA_1849 0.86 -0.8
367,193 + 10217 mRNA_1849 0.87 1.1
367,199 + 10217 mRNA_1849 0.87 1.9
367,203 + 10217 mRNA_1849 0.87 -0.4
367,206 - 10217 mRNA_1849 0.87 -1.8
367,312 - 0.6
367,350 - 0.6
367,354 + -0.6
367,366 - 1.0
367,380 + 0.6
367,498 + 0.2
367,518 - 0.5
367,519 + 0.7
367,649 + 0.4
367,654 - -0.2
367,655 + -0.4
367,671 + 2.0
367,693 + -0.8
367,713 + 0.5
367,717 - 0.3
367,726 + -1.4
367,728 + 2.0
367,747 - 0.1
367,748 - 0.4
367,755 + -0.8
367,757 + -2.2
367,773 - -1.1
367,774 - -0.2
367,779 - 1.1
367,784 + -0.2
367,789 + -0.8
367,895 + -0.2
367,898 - 0.1
367,909 + -1.3
367,909 - 1.2
367,912 - 0.5
367,916 - 2.8
367,921 - 0.4
367,936 + 0.7
367,939 + 1.1
367,940 + 1.6
367,940 - 1.1
367,960 + -1.3
367,962 + 0.3
367,968 - -0.6
367,985 - -1.4
367,994 + -0.8
367,998 + -0.2
368,031 - 1.4
368,051 + -0.5
368,055 - 1.2
368,064 - 1.3
368,067 + -0.1
368,085 - 0.8
368,109 + -0.3
368,120 - 0.2
368,146 + 0.8
368,407 - -1.4