Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1831

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1830: 10198 - K00809 DHPS, dys deoxyhypusine synthase, at 317311 to 318689 10198 mRNA_1831: 10199 - KOG3274 Uncharacterized conserved protein, AMMECR1, at 318985 to 319920 10199 mRNA_1832: 10200 - K11188 PRDX6 peroxiredoxin 6, 1-Cys peroxiredoxin, at 320371 to 321858 10200

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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318,870 - 0.5
318,954 - 1.3
318,955 + -1.0
318,961 - 1.0
318,978 + -0.0
319,117 - 10199 mRNA_1831 0.14 -1.3
319,248 - 10199 mRNA_1831 0.28 0.6
319,554 + 10199 mRNA_1831 0.61 0.4
319,679 + 10199 mRNA_1831 0.74 0.2
319,841 - 0.1
319,843 - -1.1
319,925 + 0.5
319,982 - 0.3
319,989 - 0.8
319,991 + -0.1
319,991 + 1.2
320,002 - -0.5
320,003 - 3.1
320,008 + 0.1
320,038 + 0.7
320,043 + 1.5
320,069 + 0.6
320,088 - 0.6
320,094 - 0.0
320,105 + 0.6
320,111 - 0.6
320,111 + 1.3
320,118 + -1.5
320,126 + -0.8
320,133 - -0.4
320,136 - 0.4
320,136 - -0.6
320,137 + 0.1
320,139 - 1.0
320,140 + -0.4
320,141 - 0.4
320,143 - 0.5
320,149 - -1.3
320,166 + 0.6
320,288 + 0.2
320,310 + -0.4
320,871 + 10200 mRNA_1832 0.34 -0.0
320,916 - 10200 mRNA_1832 0.37 0.3