Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1752

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1751: 10119 - KOG2726 Mitochondrial polypeptide chain release factor, at 114675 to 115608 10119 mRNA_1752: 10120 - K15363 FAN1, MTMR15 fanconi-associated nuclease 1, at 115772 to 119229 10120 mRNA_1753: 10121 - BLAST ubiquitin ligase SCF complex subunit Cullin [Rhizocto..., at 119508 to 121647 10121

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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114,931 - 10119 mRNA_1751 0.27 0.7
114,946 + 10119 mRNA_1751 0.29 -0.4
115,808 + -0.2
116,310 + 10120 mRNA_1752 0.16 -0.6
116,334 - 10120 mRNA_1752 0.16 -0.0
116,390 + 10120 mRNA_1752 0.18 0.2
116,779 - 10120 mRNA_1752 0.29 -0.6
116,809 + 10120 mRNA_1752 0.30 0.1
116,904 + 10120 mRNA_1752 0.33 1.3
116,945 + 10120 mRNA_1752 0.34 -2.5
116,956 + 10120 mRNA_1752 0.34 -1.4
116,996 - 10120 mRNA_1752 0.35 -0.1
117,139 + 10120 mRNA_1752 0.40 1.4
117,296 - 10120 mRNA_1752 0.44 0.8
117,300 + 10120 mRNA_1752 0.44 3.2
117,404 + 10120 mRNA_1752 0.47 0.4
117,425 + 10120 mRNA_1752 0.48 2.1
117,558 - 10120 mRNA_1752 0.52 0.3
117,593 + 10120 mRNA_1752 0.53 -0.5
117,993 + 10120 mRNA_1752 0.64 -1.4
118,445 + 10120 mRNA_1752 0.77 0.2
118,849 + 10120 mRNA_1752 0.89 -1.6
119,011 - 0.7
119,018 + 2.3
119,020 - 0.9
119,155 + -0.8
119,233 - -0.3
119,282 - -0.4
119,312 + -0.2
119,314 + 0.8
119,330 - 0.6
119,343 + 1.8
119,444 - -0.2
119,446 - 0.4
119,459 + 0.1
119,470 + 0.2
119,604 + 0.6
119,729 - 10121 mRNA_1753 0.10 0.4
119,733 - 10121 mRNA_1753 0.11 1.0
119,734 - 10121 mRNA_1753 0.11 0.4
119,884 + 10121 mRNA_1753 0.18 0.0
119,884 + 10121 mRNA_1753 0.18 -0.7
119,893 + 10121 mRNA_1753 0.18 1.3
119,934 - 10121 mRNA_1753 0.20 1.8
119,992 - 10121 mRNA_1753 0.23 0.6
120,013 - 10121 mRNA_1753 0.24 0.0