Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1725

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46697 to 49542 10093 mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969 10094

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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46,215 - -1.3
46,337 - -0.3
46,352 + -1.8
46,483 + -0.7
46,494 + 0.9
46,496 - 0.6
46,503 + -0.3
46,568 + 0.6
46,657 - 2.8
46,783 + 1.7
46,789 + 1.2
46,803 + 2.3
46,812 - 2.0
46,813 + 0.2
46,833 - -0.5
46,874 - 1.8
46,888 - 1.5
46,895 + 0.3
46,898 - 1.8
46,925 - 0.5
46,939 - 1.8
47,113 + 10093 mRNA_1725 0.15 1.3
47,200 - 10093 mRNA_1725 0.18 1.1
47,412 + 10093 mRNA_1725 0.25 1.1
47,548 + 10093 mRNA_1725 0.30 -0.3
47,682 + 10093 mRNA_1725 0.35 1.3
47,695 - 10093 mRNA_1725 0.35 -0.1
47,703 - 10093 mRNA_1725 0.35 2.9
47,731 + 10093 mRNA_1725 0.36 1.6
47,832 + 10093 mRNA_1725 0.40 1.1
48,061 - 10093 mRNA_1725 0.48 1.4
48,202 - 10093 mRNA_1725 0.53 0.5
48,204 - 10093 mRNA_1725 0.53 1.9
48,225 + 10093 mRNA_1725 0.54 0.6
48,367 + 10093 mRNA_1725 0.59 1.6
48,389 - 10093 mRNA_1725 0.59 2.3
48,430 + 10093 mRNA_1725 0.61 -0.2
48,440 - 10093 mRNA_1725 0.61 0.9
48,446 + 10093 mRNA_1725 0.61 2.7
48,446 + 10093 mRNA_1725 0.61 2.5
48,532 - 10093 mRNA_1725 0.64 1.5
48,535 + 10093 mRNA_1725 0.65 1.3
48,562 - 10093 mRNA_1725 0.66 1.9
48,573 + 10093 mRNA_1725 0.66 1.8
48,808 - 10093 mRNA_1725 0.74 2.5
48,878 - 10093 mRNA_1725 0.77 1.1
48,944 - 10093 mRNA_1725 0.79 1.3
49,016 + 10093 mRNA_1725 0.81 0.6
49,111 + 10093 mRNA_1725 0.85 2.0
49,429 + 0.3
49,516 - -0.6
49,581 + 0.7
49,653 + 0.0
49,738 - 2.2
49,995 + 0.8
49,999 - 1.1
50,094 + 2.9
50,176 + 0.8
50,523 - 10094 mRNA_1726 0.25 -0.4