Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1560

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1559: 9927 - Hypothetical Protein, at 594333 to 596246 9927 mRNA_1560: 9928 - HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370, at 596443 to 598270 9928 mRNA_1561: 9929 - K01920 gshB, GSS glutathione synthase, at 598631 to 600413 9929

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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596,116 - 1.2
596,310 - 0.1
596,323 + -1.4
596,323 + -1.1
596,417 + 0.4
596,419 + 0.2
596,424 + 0.1
596,608 - 2.6
596,814 + 9928 mRNA_1560 0.20 0.7
597,038 + 9928 mRNA_1560 0.33 3.2
597,579 + 9928 mRNA_1560 0.62 -0.2
598,006 - 9928 mRNA_1560 0.86 0.9
598,006 - 9928 mRNA_1560 0.86 1.2
598,146 + -0.2
598,308 - 0.7
598,425 - 0.2
598,439 + -1.4
598,441 + -1.0
598,563 - 0.5
598,586 + -0.0
598,589 - -0.2
598,592 + 1.0
598,624 + -0.2