Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1549

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566553 to 567814 9916 mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568669 to 569316 9917 mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569375 to 570862 9918

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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567,983 + 0.5
568,171 - 0.4
568,282 - -0.7
568,295 - 0.4
568,444 - -0.0
568,450 - 1.7
568,461 + 0.5
568,583 + -0.7
568,864 - 9917 mRNA_1549 0.30 0.5
568,905 + 9917 mRNA_1549 0.36 0.1
568,919 - 9917 mRNA_1549 0.39 -0.6
569,026 - 9917 mRNA_1549 0.55 -0.1
569,044 + 9917 mRNA_1549 0.58 0.5
569,189 + 9917 mRNA_1549 0.80 0.7
569,311 + -0.3
569,342 + -2.4
569,465 - -0.5
569,468 + -0.9
569,875 - 9918 mRNA_1550 0.34 0.4