Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1522

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1521: 9889 - HMMPfam-DNA polymerase delta, subunit 4-PF04081, at 501491 to 502163 9889 mRNA_1522: 9890 - K06685 MOB1, Mats MOB kinase activator 1, at 502826 to 504110 9890 mRNA_1523: 9891 - Hypothetical Protein, at 504257 to 504927 9891

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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501,993 + 9889 mRNA_1521 0.75 0.6
502,138 - -0.2
502,143 + 1.8
502,147 + -3.0
502,169 - 0.6
502,170 + 0.2
502,171 - 0.0
502,314 + -1.4
502,440 - 0.9
502,441 + -0.1
502,451 + 0.1
502,457 - -0.9
502,475 + -1.3
502,575 - -1.1
502,609 + 0.4
502,611 + 2.0
502,626 + -0.8
502,899 + 0.5
503,455 - 9890 mRNA_1522 0.49 -0.4
503,475 + 9890 mRNA_1522 0.51 2.0
503,478 - 9890 mRNA_1522 0.51 0.8
503,488 + 9890 mRNA_1522 0.52 0.7
503,611 + 9890 mRNA_1522 0.61 -0.3
503,886 - 9890 mRNA_1522 0.82 1.4
504,058 + -0.1
504,075 - -1.0
504,212 + 0.4
504,353 - 9891 mRNA_1523 0.14 -0.1
504,362 - 9891 mRNA_1523 0.16 0.0
504,363 + 9891 mRNA_1523 0.16 0.6
504,367 - 9891 mRNA_1523 0.16 1.2
504,367 + 9891 mRNA_1523 0.16 -4.1
504,522 + 9891 mRNA_1523 0.39 0.9
504,806 - 9891 mRNA_1523 0.82 -0.0
504,826 + 9891 mRNA_1523 0.85 -0.8
505,105 + -0.4
505,107 + 0.0