Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1461

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1460: 9828 - K06911 K06911 uncharacterized protein, at 344701 to 345995 9828 mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346696 to 347592 9829 mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347942 to 349022 9830

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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345,883 + 0.4
345,887 - -0.6
345,887 - 1.8
346,045 + 0.8
346,183 - -0.8
346,184 - 1.4
346,320 - 1.8
346,483 + -0.7
346,504 - -0.6
346,922 + 9829 mRNA_1461 0.25 0.4
347,199 + 9829 mRNA_1461 0.56 0.7
347,208 + 9829 mRNA_1461 0.57 0.5
347,287 + 9829 mRNA_1461 0.66 -0.4
347,330 + 9829 mRNA_1461 0.71 0.9
347,489 + 9829 mRNA_1461 0.88 0.9
347,761 + -0.4
347,872 + 0.2